CDS
| Accession Number | TCMCG002C07961 |
| gbkey | CDS |
| Protein Id | XP_020086204.1 |
| Location | complement(join(15496558..15496570,15496937..15497225,15497456..15497918,15498187..15498340,15498460..15498569,15499040..15499297,15499378..15499431,15499933..15500043,15500125..15500280,15500801..15501167,15501407..15501474,15502006..15502116,15502226..15502426,15502788..15502889,15503189..15503296,15503500..15503681,15503913..15504018,15504916..15504993,15505079..15505339,15505568..15505825,15505991..15506125)) |
| Gene | LOC109708792 |
| GeneID | 109708792 |
| Organism | Ananas comosus |
Protein
| Length | 1194aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA371634 |
| db_source | XM_020230615.1 |
| Definition | DExH-box ATP-dependent RNA helicase DExH11 isoform X4 [Ananas comosus] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | rRNA-processing arch domain |
| KEGG_TC | - |
| KEGG_Module |
M00392
[VIEW IN KEGG] |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03019 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12599
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03018
[VIEW IN KEGG] map03018 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGATCGAATCGCGGCGGCCAACGAGGTCGCCTTTAGGATCGGATTCTCCGGCCACAGCGGCCACCTCCGCCTCGAGCCTCTCCCACCCGTCGAAAGCTCCGGCCCCTTCAACGCTCTCCCCGATTTCATCCTCCCGCCGGCGTTCCCTCCGGAGACACCGGAAACTGTGAAGGAGTATCTGGAGGAAAGTTACCTCCGGCCGGAGTTGGATGCTGATGAGTTTTCAGTGGAGAAGTCCGGGAGGCTGTGGGAATTTGATTGGTTTAATGCAGCCAAGGTTCCCCTGGAGCCGTCAGCTCCTCGCTCAGTCGTGGCCCCCAGGTGGGAGTTGCCCTTCAGGAGATCTGCAAAGGCCGGTCCGTCGGGAATATGGGATCCCGATTCGGCACAGATAGATATAGCAGAGCTAATGGATGGAGCTCAGGATTCTGGAGGCTTGTTGCGTATGCCAGGACCTGCTAAGGATTTTGTAAGAGGAAGTATCAACAATCGTCCATTCCGACCAGGAGGTTTGGATGATTCCCAGGCGTCGGAGAGGGCTCTTCCTGAGGGTGCTCGCAATGGCGATTGGGTTCGTGAACTTATAGGGGGCGGCAGTGCTCAAACTGTTCCTCCTAGTTTTCGGAAAGGAATGGATTTAGGCTGTATTATGGAATATCCATATCGTTGGAAGTCTGCCAGAGAGAAGTGTGCTGATGATCATGCTGAGGGAGCAACAGAAGAAAACCTGAATAAGTATTCAGTCCAATTTGATGATTTATTCAAGAAAGCTTGGGAAGAAGATGCTACTAAGCAAGCTTGGCAAGAAGATGCTAGCAAACAATCAGGAAGTGATGGTTTGCCAGACCTTGCAGTTGAAGCAGAGAGCGAGGCCATTAATGTTGTTCGTGAAGCCGAAACGTCTAATGTTATTCCTGAAGCAGAAACTTCTTTCGATCAGATATTAGTGAATGAGTCAGAGAAAATCATAGAGAAGTTTGATGGATTAGGTGATGACAAAAAGAAGAATGAAGGAGAGGCTTGGGCTCTTGTTGGTGGAACTGAAGAGATTATGGGCAGCTTCAATGAACTTGTGCCGAACATGGCTGTTGAGTATCCTTTTGAATTGGATAAGTTCCAAAAGGAGGCGATATATTTTCTCGAGAGGGGTGATTCTGTTTTTGTCGCAGCTCATACTTCGGCTGGAAAAACAGTTGTTGCAGAGTATGCATTTGCTTTAGCTTCAAAACATTGTACCCGGGCTGTCTATACTGCTCCTATAAAAACCATCAGTAATCAGAAATACAGAGATTTCTGTGGAAAGTTTGACGTCGGCCTTCTTACAGGAGATGTAAGCATAAGGCCTGAGGCATCTTGCCTTATTATGACTACCGAAATATTAAGGTCGATGCTTTACCGAGGTGCTGATATTATTCGTGACATTGAATGGGTTATATTTGACGAAGTGCATTACGTGAATGACGTTGAAAGAGGTGTAGTCTGGGAAGAAGTTATCATAATGTTGCCAAGACATGTCAATATTGTACTTCTTTCAGCAACGGTCCCAAATACGGTTGAATTTGCAGACTGGATTGGTCGGACAAAACAGAAAAAGATCCGCGTCATTTGGACTACAAAAAGACCTGTCCCTCTTGAGCATTGTTTGTTCTATTCTGGAGAATTATACAAAGTATGTGAGAATGACGTGTTTCTTCCTCAAGGATTTAGAGCAGCTAAAGATGCTTACAAGAAGAAAAACTCCAATACACTTGGAGCCAAATCTGCTGCAAGAACAGTACCTACAGGACCTGGTAGTACAGCTCCAGTGAGACAATCGGATAATTCTAGTCGAGGGAGAGGTCAGAAGTACCCCAAACATCAGACTATTGACTCGGGAACTACTGGAGTACACCAAAACAGTTCAGGACCAAAGAGATCAGATGCGTCTTCATGGTTGTCGCTTGTAAATAAGCTTTCAAAGATGTCCCTCTTGCCCGTGGTTATTTTCTGCTTCTCAAAAAACCGTTGTGATAAATCAGCAGATAGCATGTATGCAACTGACCTCACAAGTAATTCTGAGAAAAGGGAAATACGTGTCTTCTGTGACAAGGCTTTTTCACGCCTTAAGGGATCTGACAGGAGCCTTCCACAAGTTGTCAGAATCCAAAGCCTTCTACGAAGAGGAATTGGTGTCCACCATGCTGGGCTTCTTCCTATTGTTAAAGAAGTTGTTGAGATGCTTTTTTGTCGTGGTGTAATAAAGGTACTATTCTCCACCGAGACATTTGCAATGGGAGTTAATGCCCCAGCAAGAACAGTTGTTTTCGATGCTTTAAGAAAGTTTGATGGCAAGGAATTCAGGAAGTTGCTTCCAGGGGAATATATTCAAATGGCTGGACGTGCTGGTAGGAGAGGACTAGATAAGATTGGTACAGTTATCATTATGTGTCGTGATGAAATTCCTGAGGAAAGTGACTTGAAAAATGTAATCGTTGGGAAACCAACTCGACTTGAGTCTCAGTTTCGACTGACATACATCATGATACTCCATCTACTTCGTGTCGAAGAACTGAAGGTGGAGGACATGCTTAAGAGAAGCTTTGCAGAATTTCATGCGCAGAAGAACTTGCCTGAAAAAGAAAGACTTCTTCTGCAAAAGCTAAGGCAACCAACTAAAATTATTGAGTGCATAAAAGGTGAGCCTTCTATTGAAGAGTACTACGATATGGCACTGAAAGCTGAGACATATAGAGAAGATATATCGGAGGCAGTCATGCAGTCATCCTATGCTCAGCAATTTCTGTCGCCTGGAAGAGTTGTGATCATCAAGTCACAAGTAGCTGAAGATCACCTACTTGGAGTTGTCCTGAAAAATCCATCTGCTACATTTAAACAGTACATTGTATTAATACTGATGACCGAGAGCAGTTCATCTGTGCAATCTCCATCCCTTTCCCCCATACAAGAAAAGGAAAGTGGCAACTTCCAGCCAGGCTATTTTGTTGTCCCAAAAGGAAAACGTGGAATGGATGACGAGTACTTCTCATCCATCAGTTCGCGCAAAGGATCTGGTGCTGTTAATATAAAGCTGCCGCACAGTGGAACTGCTGCTGGGGTGAGTTATCAAGTTATACCAATAGAGAGCAAAGAAATTATGAGTATATGCGATTGCAAAATTAAGATAGATCAAGTCCGGCTTCTTGAAGATCCCAGCAATGCTGCCTACTCTAAAACTGTTCAGCAGCTTTTAGAGAAGAAACCAGATGGAAGCAAATTTCCTGCTGCTTTAGATGCTGTAAAGGATCTCAAGATGAAAGATATGTTACTCGTAGAGAAATACCATGCATATAATAAGCTATTGCAAAGAATGTCTGAAAACAAGTGCCATGGGTGTATAAAATTGATGGAACACATTGCATTGATTAAGGAGCAAAAGCAGCATAAAGAGGAAGTTAAAGCTTTAAAATATCAAATGTCGGATGAGGCGCTTCAACAAATGCCAGAATTTCAAGGCCGGGTTAGTCTGGCTTTCCTTTTACTCTTCTTGCGTGCTGCCGTAACTGTTTGGAGATATAGACAATTTGGACAAAGATTGATGTGTTGA |
| Protein: MDRIAAANEVAFRIGFSGHSGHLRLEPLPPVESSGPFNALPDFILPPAFPPETPETVKEYLEESYLRPELDADEFSVEKSGRLWEFDWFNAAKVPLEPSAPRSVVAPRWELPFRRSAKAGPSGIWDPDSAQIDIAELMDGAQDSGGLLRMPGPAKDFVRGSINNRPFRPGGLDDSQASERALPEGARNGDWVRELIGGGSAQTVPPSFRKGMDLGCIMEYPYRWKSAREKCADDHAEGATEENLNKYSVQFDDLFKKAWEEDATKQAWQEDASKQSGSDGLPDLAVEAESEAINVVREAETSNVIPEAETSFDQILVNESEKIIEKFDGLGDDKKKNEGEAWALVGGTEEIMGSFNELVPNMAVEYPFELDKFQKEAIYFLERGDSVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVSIRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDVERGVVWEEVIIMLPRHVNIVLLSATVPNTVEFADWIGRTKQKKIRVIWTTKRPVPLEHCLFYSGELYKVCENDVFLPQGFRAAKDAYKKKNSNTLGAKSAARTVPTGPGSTAPVRQSDNSSRGRGQKYPKHQTIDSGTTGVHQNSSGPKRSDASSWLSLVNKLSKMSLLPVVIFCFSKNRCDKSADSMYATDLTSNSEKREIRVFCDKAFSRLKGSDRSLPQVVRIQSLLRRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDALRKFDGKEFRKLLPGEYIQMAGRAGRRGLDKIGTVIIMCRDEIPEESDLKNVIVGKPTRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKNLPEKERLLLQKLRQPTKIIECIKGEPSIEEYYDMALKAETYREDISEAVMQSSYAQQFLSPGRVVIIKSQVAEDHLLGVVLKNPSATFKQYIVLILMTESSSSVQSPSLSPIQEKESGNFQPGYFVVPKGKRGMDDEYFSSISSRKGSGAVNIKLPHSGTAAGVSYQVIPIESKEIMSICDCKIKIDQVRLLEDPSNAAYSKTVQQLLEKKPDGSKFPAALDAVKDLKMKDMLLVEKYHAYNKLLQRMSENKCHGCIKLMEHIALIKEQKQHKEEVKALKYQMSDEALQQMPEFQGRVSLAFLLLFLRAAVTVWRYRQFGQRLMC |